STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgmPutative phosphoglucomutase; Protein synonym:glucose phosphomutase. (476 aa)    
Predicted Functional Partners:
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.871
pgi
Protein synonym:phosphoglucose isomerase; Belongs to the GPI family.
  
  
 0.826
galT
Putative galactose-1-phosphate uridylyltransferase; Protein synonym:UDP-glucose--hexose-1-phosphate uridylyltransferase.
     
 0.817
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
     
 0.793
CSE_09120
Peptidase S41 family protein; Belongs to the peptidase S41A family.
   
 
 0.787
CSE_09070
Putative glycoside hydrolase.
       0.767
dacA
Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
   
 
 0.682
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
 0.636
CSE_09060
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
     
 0.560
CSE_09020
Amidohydrolase.
       0.543
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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