STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_09920Hypothetical protein. (325 aa)    
Predicted Functional Partners:
CSE_09930
Hypothetical protein.
 
  
 0.926
CSE_09910
Putative ATPase.
 
  
 0.902
CSE_09900
Putative A-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
     0.833
pdp
Putative pyrimidine-nucleoside phosphorylase.
       0.778
punA
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.773
CSE_09860
Hypothetical protein.
       0.762
CSE_09870
Hypothetical protein.
       0.762
pilM
Putative type IV pilus assembly protein PilM.
 
     0.533
CSE_07770
Putative ATPase.
 
  
 0.532
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
    0.513
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.