STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_10240Dye-linked L-proline dehydrogenase gamma subunit. (163 aa)    
Predicted Functional Partners:
CSE_10250
Dye-linked L-proline dehydrogenase alpha subunit.
     0.994
CSE_10230
Dye-linked L-proline dehydrogenase delta subunit.
 
  
 0.955
CSE_10220
Dye-linked L-proline dehydrogenase beta subunit.
 
  
 0.953
CSE_04160
Putative glutamate synthase.
  
 0.807
korD
Putative 2-oxoglutarate ferredoxin oxidoreductase delta subunit.
  
 0.784
CSE_11930
Putative formate dehydrogenase alpha subunit.
  
 0.784
aor
Tungsten-containing aldehyde ferredoxin oxidoreductase.
   
 
 0.651
aor-2
Tungsten-containing aldehyde ferredoxin oxidoreductase.
   
 
 0.651
rnfB
Putative electron transport complex protein RnfB.
   
 
 0.650
CSE_04120
NuoH-like protein.
  
 0.649
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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