STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_11900Putative FdhD protein homolog. (233 aa)    
Predicted Functional Partners:
CSE_11930
Putative formate dehydrogenase alpha subunit.
 
 0.975
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
 
 
 0.968
CSE_11940
Putative formate dehydrogenase beta subunit.
  
  
 0.885
CSE_11960
Putative NADH dehydrogenase subunit.
  
  
 0.885
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
 0.831
CSE_11920
Putative formate transporter.
     
 0.830
CSE_11950
Putative formate dehydrogenase gamma subunit.
     
 0.789
CSE_11990
Putative NADH dehydrogenase subunit.
     
 0.789
CSE_11970
Hypothetical protein.
     
 0.766
CSE_11980
Putative two-component system sensor histidine kinase.
       0.732
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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