STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_13420Hypothetical protein. (279 aa)    
Predicted Functional Partners:
CSE_13410
Hypothetical protein.
       0.779
CSE_13400
Aspartate aminotransferase.
       0.652
hutI
Imidazolonepropionase; Protein synonym:imidazolone-5-propionate hydrolase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
       0.493
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
       0.493
CSE_13370
Putative glutamate formiminotransferase; Protein synonym:glutamate formimidoyltransferase.
       0.484
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.