STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_13470Amino acid ABC transporter permease protein. (227 aa)    
Predicted Functional Partners:
CSE_13480
Amino acid ABC transporter ATP-binding protein.
 0.999
CSE_13500
Amino acid ABC transporter substrate binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.998
CSE_05110
Putative glutamine ABC transporter ATP-binding protein.
 0.992
CSE_05130
Putative glutamine ABC transporter substrate binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.992
CSE_13490
Amino acid ABC transporter permease protein.
 
  
 
0.980
CSE_15770
Putative ABC transporter ATP-binding protein.
 
 
 0.713
CSE_13710
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.621
potA
ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.592
CSE_09370
Putative ABC transporter ATP-binding protein.
   
  0.588
CSE_09060
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
   
 0.565
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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