STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_14780ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (317 aa)    
Predicted Functional Partners:
CSE_14790
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
CSE_14800
ABC transporter ATP-binding protein.
 
 0.995
CSE_09000
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.988
CSE_14810
ABC transporter substrate binding protein.
 
 
 0.984
CSE_08990
ABC transporter ATP-binding protein.
 
 0.981
CSE_14140
ABC transporter ATP-binding protein.
 
 0.980
CSE_14130
ABC transporter substrate binding protein.
 
 
 0.964
CSE_14150
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.957
CSE_09010
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.920
CSE_14160
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.917
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.