STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_15290Putative glycosyltransferase. (450 aa)    
Predicted Functional Partners:
CSE_15300
Putative glycosyltransferase.
  
 0.982
CSE_15350
Putative glycosyltransferase.
  
 0.921
CSE_15310
Putative glycosyltransferase.
  
 0.912
CSE_15330
Putative glycosyltransferase.
 
  
 0.904
CSE_07560
Putative glycosyltransferase; Belongs to the glycosyltransferase 26 family.
    
 0.884
CSE_15320
Putative glycosyltransferase.
       0.791
CSE_04320
Putative glycosyltransferase.
 
  
 0.779
CSE_08250
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.675
CSE_15340
Hypothetical protein.
       0.645
CSE_04340
O-antigen polymerase family protein.
  
  
 0.631
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.