STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_15530Putative two-component system hybrid sensor and regulator. (823 aa)    
Predicted Functional Partners:
CSE_01430
OmpR family two-component system response regulator.
 
 0.930
CSE_07810
OmpR family two-component system response regulator.
 
 
 0.929
CSE_06010
OmpR family two-component system response regulator.
 
 
 0.928
CSE_15520
Response regulator receiver protein.
 
 0.919
acoC
Acetoin dehydrogenase E2 component; Protein synonym:dihydrolipoamide acetyltransferase.
    
 0.803
acoB
Protein synonym:TPP-dependent acetoin dehydrogenase E1 beta subunit; protein synonym:acetoin--2,6-dichlorophenolindophenol oxidoreductase beta subunit.
    
 0.687
prs
Phosphoribosylpyrophosphate synthase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.658
lpd
Protein synonym:dihydrolipoyl dehydrogenase.
    
 0.641
CSE_15540
Putative peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
 
 0.616
gap
Glyceraldehyde-3-phosphate dehydrogenase; Protein synonym:GAPDH; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 0.597
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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