Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GU3_03640 | GU3_03645 | GU3_03640 | GU3_03645 | Nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase; COG0388 Predicted amidohydrolase. | Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.951 |
GU3_03640 | GU3_03650 | GU3_03640 | GU3_03650 | Nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase; COG0388 Predicted amidohydrolase. | Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | 0.951 |
GU3_03640 | murB | GU3_03640 | GU3_03655 | Nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase; COG0388 Predicted amidohydrolase. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.531 |
GU3_03645 | GU3_03640 | GU3_03645 | GU3_03640 | Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase; COG0388 Predicted amidohydrolase. | 0.951 |
GU3_03645 | GU3_03650 | GU3_03645 | GU3_03650 | Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | 0.952 |
GU3_03645 | murB | GU3_03645 | GU3_03655 | Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.509 |
GU3_03650 | GU3_03640 | GU3_03650 | GU3_03640 | Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | Nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase; COG0388 Predicted amidohydrolase. | 0.951 |
GU3_03650 | GU3_03645 | GU3_03650 | GU3_03645 | Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.952 |
GU3_03650 | murB | GU3_03650 | GU3_03655 | Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.530 |
GU3_03650 | rlmJ | GU3_03650 | GU3_05210 | Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | Hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA. | 0.461 |
murB | GU3_03640 | GU3_03655 | GU3_03640 | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | Nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase; COG0388 Predicted amidohydrolase. | 0.531 |
murB | GU3_03645 | GU3_03655 | GU3_03645 | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.509 |
murB | GU3_03650 | GU3_03655 | GU3_03650 | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | 0.530 |
rlmJ | GU3_03650 | GU3_05210 | GU3_03650 | Hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA. | Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | 0.461 |