Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ibaG | yoaF | b3190 | b1793 | Acid stress protein ibag; Involved in cell resistance against acid stress | annotation not available | 0.514 |
| yeaP | yoaF | b1794 | b1793 | Diguanylate cyclase dgcp; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria | annotation not available | 0.543 |
| yeaP | yoaJ | b1794 | b4675 | Diguanylate cyclase dgcp; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria | annotation not available | 0.791 |
| yeaP | yoaK | b1794 | b4676 | Diguanylate cyclase dgcp; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria | annotation not available | 0.820 |
| ygaU | yoaF | b2665 | b1793 | Uncharacterized protein; Highly specific potassium binding protein that is required for normal growth in the presence of high levels of external K(+). May act as a sensor of cytoplasmic K(+) concentration. Binds a single K(+) ion, which induces a large conformational change. Can also bind the larger alkali metal ions Rb(+) and Cs(+), and NH(4)(+) . May be involved in the regulation of peptidoglycan cross-linking | annotation not available | 0.487 |
| ygiN | yoaF | b3029 | b1793 | Putative quinol monooxygenase ygin; Can oxidize menadiol to menadione | annotation not available | 0.451 |
| yoaF | ibaG | b1793 | b3190 | annotation not available | Acid stress protein ibag; Involved in cell resistance against acid stress | 0.514 |
| yoaF | yeaP | b1793 | b1794 | annotation not available | Diguanylate cyclase dgcp; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria | 0.543 |
| yoaF | ygaU | b1793 | b2665 | annotation not available | Uncharacterized protein; Highly specific potassium binding protein that is required for normal growth in the presence of high levels of external K(+). May act as a sensor of cytoplasmic K(+) concentration. Binds a single K(+) ion, which induces a large conformational change. Can also bind the larger alkali metal ions Rb(+) and Cs(+), and NH(4)(+) . May be involved in the regulation of peptidoglycan cross-linking | 0.487 |
| yoaF | ygiN | b1793 | b3029 | annotation not available | Putative quinol monooxygenase ygin; Can oxidize menadiol to menadione | 0.451 |
| yoaF | yoaJ | b1793 | b4675 | annotation not available | annotation not available | 0.479 |
| yoaF | yoaK | b1793 | b4676 | annotation not available | annotation not available | 0.479 |
| yoaF | yraP | b1793 | b3150 | annotation not available | Divisome-associated lipoprotein yrap; Uncharacterized protein YraP; Putative periplasmic protein | 0.416 |
| yoaF | ytfJ | b1793 | b4216 | annotation not available | annotation not available | 0.519 |
| yoaJ | yeaP | b4675 | b1794 | annotation not available | Diguanylate cyclase dgcp; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria | 0.791 |
| yoaJ | yoaF | b4675 | b1793 | annotation not available | annotation not available | 0.479 |
| yoaJ | yoaK | b4675 | b4676 | annotation not available | annotation not available | 0.980 |
| yoaK | yeaP | b4676 | b1794 | annotation not available | Diguanylate cyclase dgcp; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria | 0.820 |
| yoaK | yoaF | b4676 | b1793 | annotation not available | annotation not available | 0.479 |
| yoaK | yoaJ | b4676 | b4675 | annotation not available | annotation not available | 0.980 |
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