Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dsrB | hycA | b1952 | b2725 | Uncharacterized protein. | Regulator of the transcriptional regulator FhlA; Regulatory protein for the formate hydrogenlyase system. Could act by directly interacting with FhlA or by preventing the binding of FhlA to the upstream activatory sequence. Also down-regulates expression of the hyf operon. | 0.522 |
dsrB | mcrA | b1952 | b1159 | Uncharacterized protein. | Putative 5-methylcytosine/5-hydroxymethylcytosine-specific restriction nuclease; Restriction of 5-methyl and 5-hydroxymethylcytosines at the specific DNA sequence C(me)CGG. | 0.519 |
dsrB | yciZ | b1952 | b4596 | Uncharacterized protein. | Uncharacterized protein. | 0.803 |
dsrB | ydcY | b1952 | b1446 | Uncharacterized protein. | DUF2526 family protein. | 0.645 |
dsrB | yffR | b1952 | b2449 | Uncharacterized protein. | CPZ-55 prophage; uncharacterized protein. | 0.806 |
dsrB | ygaC | b1952 | b2671 | Uncharacterized protein. | Uncharacterized protein. | 0.804 |
dsrB | yjbT | b1952 | b4620 | Uncharacterized protein. | Putative periplasmic protein; Belongs to the YjbT family. | 0.601 |
dsrB | yjiM | b1952 | b4335 | Uncharacterized protein. | Putative 2-hydroxyglutaryl-CoA dehydratase; Belongs to the FldB/FldC dehydratase alpha/beta subunit family. | 0.599 |
dsrB | ymgI | b1952 | b4593 | Uncharacterized protein. | Uncharacterized protein. | 0.477 |
dsrB | yodD | b1952 | b1953 | Uncharacterized protein. | Uncharacterized protein. | 0.785 |
hycA | dsrB | b2725 | b1952 | Regulator of the transcriptional regulator FhlA; Regulatory protein for the formate hydrogenlyase system. Could act by directly interacting with FhlA or by preventing the binding of FhlA to the upstream activatory sequence. Also down-regulates expression of the hyf operon. | Uncharacterized protein. | 0.522 |
hycA | ygaC | b2725 | b2671 | Regulator of the transcriptional regulator FhlA; Regulatory protein for the formate hydrogenlyase system. Could act by directly interacting with FhlA or by preventing the binding of FhlA to the upstream activatory sequence. Also down-regulates expression of the hyf operon. | Uncharacterized protein. | 0.644 |
mcrA | dsrB | b1159 | b1952 | Putative 5-methylcytosine/5-hydroxymethylcytosine-specific restriction nuclease; Restriction of 5-methyl and 5-hydroxymethylcytosines at the specific DNA sequence C(me)CGG. | Uncharacterized protein. | 0.519 |
yciZ | dsrB | b4596 | b1952 | Uncharacterized protein. | Uncharacterized protein. | 0.803 |
yciZ | ydcY | b4596 | b1446 | Uncharacterized protein. | DUF2526 family protein. | 0.731 |
yciZ | yffR | b4596 | b2449 | Uncharacterized protein. | CPZ-55 prophage; uncharacterized protein. | 0.901 |
yciZ | yjbT | b4596 | b4620 | Uncharacterized protein. | Putative periplasmic protein; Belongs to the YjbT family. | 0.811 |
yciZ | yjiM | b4596 | b4335 | Uncharacterized protein. | Putative 2-hydroxyglutaryl-CoA dehydratase; Belongs to the FldB/FldC dehydratase alpha/beta subunit family. | 0.811 |
yciZ | ymgI | b4596 | b4593 | Uncharacterized protein. | Uncharacterized protein. | 0.786 |
ydcY | dsrB | b1446 | b1952 | DUF2526 family protein. | Uncharacterized protein. | 0.645 |
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