Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
insA | insA-2 | b0022 | b0265 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | IS1 repressor TnpA; Absolutely required for transposition of IS1. | 0.987 |
insA | insA-3 | b0022 | b0275 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | IS1 repressor TnpA. | 0.745 |
insA | insB1-3 | b0022 | b0274 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Pseudogene. | 0.957 |
insA | insH1 | b0022 | b0259 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Transposase InsH for insertion sequence element IS5R; Involved in the transposition of the insertion sequence IS5. | 0.541 |
insA | insH1-5 | b0022 | b1370 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Transposase InsH for insertion sequence element IS5Y; Involved in the transposition of the insertion sequence IS5. | 0.597 |
insA | insH1-6 | b0022 | b1994 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Transposase InsH for insertion sequence element IS5H; Involved in the transposition of the insertion sequence IS5. | 0.541 |
insA | insH1-9 | b0022 | b2982 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Pseudogene, IS-interrupted. | 0.541 |
insA-2 | insA | b0265 | b0022 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | IS1 repressor TnpA; Absolutely required for transposition of IS1. | 0.987 |
insA-2 | insA-3 | b0265 | b0275 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | IS1 repressor TnpA. | 0.850 |
insA-2 | insB1-3 | b0265 | b0274 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Pseudogene. | 0.958 |
insA-2 | insH1 | b0265 | b0259 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Transposase InsH for insertion sequence element IS5R; Involved in the transposition of the insertion sequence IS5. | 0.544 |
insA-2 | insH1-5 | b0265 | b1370 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Transposase InsH for insertion sequence element IS5Y; Involved in the transposition of the insertion sequence IS5. | 0.600 |
insA-2 | insH1-6 | b0265 | b1994 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Transposase InsH for insertion sequence element IS5H; Involved in the transposition of the insertion sequence IS5. | 0.544 |
insA-2 | insH1-9 | b0265 | b2982 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Pseudogene, IS-interrupted. | 0.548 |
insA-3 | insA | b0275 | b0022 | IS1 repressor TnpA. | IS1 repressor TnpA; Absolutely required for transposition of IS1. | 0.745 |
insA-3 | insA-2 | b0275 | b0265 | IS1 repressor TnpA. | IS1 repressor TnpA; Absolutely required for transposition of IS1. | 0.850 |
insA-3 | insB1-3 | b0275 | b0274 | IS1 repressor TnpA. | Pseudogene. | 0.988 |
insA-3 | insH1 | b0275 | b0259 | IS1 repressor TnpA. | Transposase InsH for insertion sequence element IS5R; Involved in the transposition of the insertion sequence IS5. | 0.541 |
insA-3 | insH1-5 | b0275 | b1370 | IS1 repressor TnpA. | Transposase InsH for insertion sequence element IS5Y; Involved in the transposition of the insertion sequence IS5. | 0.597 |
insA-3 | insH1-6 | b0275 | b1994 | IS1 repressor TnpA. | Transposase InsH for insertion sequence element IS5H; Involved in the transposition of the insertion sequence IS5. | 0.541 |
page 1 of 5