STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfbSUncharacterized transporter YfbS; Putative transport protein (610 aa)    
Predicted Functional Partners:
cysD
Belongs to the PAPS reductase family. CysD subfamily.
     
 0.752
kefC
Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. Can also export rubidium, lithium and sodium. Rule:MF_01413, ECO:0000269|PubMed:17679694,
  
  
 0.707
kefB
Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
  
  
 0.707
yjhB
Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
      
 0.673
yfbT
Sugar-phosphate phosphohydrolase that appears to contribute to butanol tolerance . Catalyzes the dephosphorylation of D-mannitol 1-phosphate and D-sorbitol 6-phosphate . Is also able to dephosphorylate other sugar phosphates in vitro including ribose-5-phosphate (Rib5P), 2-deoxyribose-5-phosphate, fructose-1-phosphate (Fru1P), fructose-6-phosphate (Fru6P), and glucose-6-phosphate (Glu6P) . Selectively hydrolyzes beta-D-glucose-1-phosphate (bGlu1P) and has no activity with the alpha form
      0.651
yfbU
annotation not available
 
    0.638
cysN
May be the GTPase, regulating ATP sulfurylase activity
      0.578
yidE
Putative transport protein
 
   
 0.537
cdaR
Seems to regulate the expression of the operons for the enzymes involved in D-galactarate, D-glucarate and D-glycerate utilization
     
 0.527
gpsA
Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family
  
    0.502
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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