STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
intZCPZ-55 prophage; putative phage integrase IntZ; Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome (402 aa)    
Predicted Functional Partners:
yffS
CPZ-55 prophage; uncharacterized protein YffS; Uncharacterized protein YffS; Phage or Prophage Related
   
  
 0.883
yffL
CPZ-55 prophage; uncharacterized protein YffL; Uncharacterized protein YffL; Phage or Prophage Related
  
  
 0.852
eutB
Ethanolamine ammonia-lyase, large subunit, heavy chain; Ethanolamine ammonia-lyase, heavy chain; Protein involved in amine catabolic process
     
 0.726
ydgK
annotation not available
      
 0.703
rclB
Reactive chlorine species (rcs) stress resistance periplasmic protein; Probably involved in reactive chlorine species (RCS) stress resistance
      
 0.701
yfaZ
annotation not available
      
 0.672
nudI
Pyrimidine deoxynucleotide diphosphatase nudi; Catalyzes the hydrolysis of nucleoside triphosphates, with a preference for pyrimidine deoxynucleoside triphosphates (dUTP, dTTP and dCTP)
    
 
 0.623
satP
Acetate/succinate:h(+) symporter; Uptake of acetate and succinate. Transport is energetically dependent on the protonmotive force
      
 0.564
lplT
Mfs transporter, lplt family, lysophospholipid transporter; Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell
  
   
 0.563
stfP
Uncharacterized protein StfP; Phage or Prophage Related; To E.coli YfdL and M.jannaschii MJ0347
      
 0.561
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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