Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dsrB | hycA | b1952 | b2725 | Uncharacterized protein. | Regulator of the transcriptional regulator FhlA; Regulatory protein for the formate hydrogenlyase system. Could act by directly interacting with FhlA or by preventing the binding of FhlA to the upstream activatory sequence. Also down-regulates expression of the hyf operon. | 0.522 |
dsrB | ygaC | b1952 | b2671 | Uncharacterized protein. | Uncharacterized protein. | 0.804 |
garP | ygaC | b3127 | b2671 | Putative (D)-galactarate transporter; Uptake of D-galactarate; Belongs to the major facilitator superfamily. Phthalate permease family. | Uncharacterized protein. | 0.739 |
garP | ynfO | b3127 | b4533 | Putative (D)-galactarate transporter; Uptake of D-galactarate; Belongs to the major facilitator superfamily. Phthalate permease family. | Uncharacterized protein YnfO; Pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin. | 0.803 |
hycA | dsrB | b2725 | b1952 | Regulator of the transcriptional regulator FhlA; Regulatory protein for the formate hydrogenlyase system. Could act by directly interacting with FhlA or by preventing the binding of FhlA to the upstream activatory sequence. Also down-regulates expression of the hyf operon. | Uncharacterized protein. | 0.522 |
hycA | ygaC | b2725 | b2671 | Regulator of the transcriptional regulator FhlA; Regulatory protein for the formate hydrogenlyase system. Could act by directly interacting with FhlA or by preventing the binding of FhlA to the upstream activatory sequence. Also down-regulates expression of the hyf operon. | Uncharacterized protein. | 0.644 |
osmB | ycfJ | b1283 | b1110 | Osmotically and stress inducible lipoprotein; Provides resistance to osmotic stress. May be important for stationary-phase survival. | Uncharacterized protein. | 0.738 |
osmB | ygaC | b1283 | b2671 | Osmotically and stress inducible lipoprotein; Provides resistance to osmotic stress. May be important for stationary-phase survival. | Uncharacterized protein. | 0.634 |
ycfJ | osmB | b1110 | b1283 | Uncharacterized protein. | Osmotically and stress inducible lipoprotein; Provides resistance to osmotic stress. May be important for stationary-phase survival. | 0.738 |
ycfJ | ygaC | b1110 | b2671 | Uncharacterized protein. | Uncharacterized protein. | 0.617 |
ycfJ | ypfG | b1110 | b2466 | Uncharacterized protein. | DUF1176 family protein. | 0.927 |
ygaC | dsrB | b2671 | b1952 | Uncharacterized protein. | Uncharacterized protein. | 0.804 |
ygaC | garP | b2671 | b3127 | Uncharacterized protein. | Putative (D)-galactarate transporter; Uptake of D-galactarate; Belongs to the major facilitator superfamily. Phthalate permease family. | 0.739 |
ygaC | hycA | b2671 | b2725 | Uncharacterized protein. | Regulator of the transcriptional regulator FhlA; Regulatory protein for the formate hydrogenlyase system. Could act by directly interacting with FhlA or by preventing the binding of FhlA to the upstream activatory sequence. Also down-regulates expression of the hyf operon. | 0.644 |
ygaC | osmB | b2671 | b1283 | Uncharacterized protein. | Osmotically and stress inducible lipoprotein; Provides resistance to osmotic stress. May be important for stationary-phase survival. | 0.634 |
ygaC | ycfJ | b2671 | b1110 | Uncharacterized protein. | Uncharacterized protein. | 0.617 |
ygaC | ygaM | b2671 | b2672 | Uncharacterized protein. | Putative membrane-anchored DUF883 family ribosome-binding protein. | 0.539 |
ygaC | yhhX | b2671 | b3440 | Uncharacterized protein. | Putative regulator; Belongs to the Gfo/Idh/MocA family. Biliverdin reductase subfamily. | 0.733 |
ygaC | yjeI | b2671 | b4144 | Uncharacterized protein. | DUF4156 family lipoprotein. | 0.621 |
ygaC | ynfO | b2671 | b4533 | Uncharacterized protein. | Uncharacterized protein YnfO; Pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin. | 0.810 |
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