STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhbTSCP-2 sterol transfer family protein; Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Likely functions as an accessory factor (174 aa)    
Predicted Functional Partners:
yhbV
U32 peptidase family protein; Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Together with UbiU, is essential for the C6-hydroxylation reaction in the oxygen-independent ubiquinone biosynthesis pathway
 
 
 0.987
yhbU
U32 peptidase family protein; Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Together with UbiV, is essential for the C6-hydroxylation reaction in the oxygen-independent ubiquinone biosynthesis pathway
 
 
 0.985
yhbS
Putative acyltransferase with acyl-coa n-acyltransferase domain; Belongs to the acetyltransferase family
 
   0.966
ylaC
annotation not available
      
 0.889
ddpF
Putative d,d-dipeptide abc transporter atp-binding subunit ddpf; Part of the ABC transporter complex DdpABCDF, which is probably involved in D,D-dipeptide transport . Probably responsible for energy coupling to the transport system
      
 0.877
yccT
DUF2057 domain-containing protein YccT; Belongs to the UPF0319 family
      
 0.739
ycfP
annotation not available
  
    0.655
yfgM
annotation not available
      
 0.602
yaeP
UPF0253 family protein YaeP; Belongs to the UPF0253 family
  
    0.601
yfbU
annotation not available
  
    0.599
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.