STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjfJPspA/IM30 family protein; Putative alpha helical protein; Belongs to the PspA/IM30 family. (232 aa)    
Predicted Functional Partners:
yjfI
DUF2170 family protein.
  
  
 0.988
yjfL
UPF0719 family inner membrane protein.
 
    0.860
yagL
CP4-6 prophage; DNA-binding protein.
      
 0.809
yffL
CPZ-55 prophage; uncharacterized protein.
      
 0.804
yagN
CP4-6 prophage; uncharacterized protein.
      
 0.802
stfR
Rac prophage; putative tail fiber protein; Belongs to the tail fiber family.
  
  
 0.778
djlB
Putative HscC co-chaperone, uncharacterized J domain-containing protein; Putative enzyme of polynucleotide modification; Protein involved in protein folding.
  
  
 0.743
yjfC
ATP-Grasp family ATPase; May be a ligase forming an amide bond. Shows ATPase activity. Despite its similarity to the C-terminal synthetase domain of Gss, is not a glutathionylspermidine (Gsp) synthetase. Cannot synthesize Gsp, glutathione (GSH), or GSH intermediates, from GSH and spermidine, cysteine and glutamate, gamma-glutamylcysteine and spermidine, and gamma-glutamylcysteine and glycine. Does not bind to Gsp. Belongs to the glutathionylspermidine synthase preATP-grasp family.
 
    0.740
yqiJ
DUF1449 family inner membrane protein; Putative oxidoreductase.
 
  
 0.727
yqiK
PHB family membrane protein, function unknown; Putative membrane protein.
 
  
 0.711
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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