Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
yffB | yobD | b2471 | b1820 | Putative ArsC family reductase; Belongs to the ArsC family. | UPF0266 family inner membrane protein. | 0.644 |
yffB | ypfM | b2471 | b4606 | Putative ArsC family reductase; Belongs to the ArsC family. | Stress-induced small enterobacterial protein. | 0.675 |
yjeV | ylcH | b4670 | b4588 | Uncharacterized protein. | Uncharacterized protein, DLP12 prophage. | 0.802 |
yjeV | yneM | b4670 | b4599 | Uncharacterized protein. | Inner membrane-associated protein; Modulates intracellular Mg(2+) levels to maintain cellular integrity upon Mg(2+) limitation. Acts by binding and stabilizing the Mg(2+) transporter MgtA, thereby leading to increased intracellular level of Mg(2+). May inhibit FtsH proteolysis of MgtA. | 0.521 |
yjeV | yniD | b4670 | b4535 | Uncharacterized protein. | Uncharacterized protein YniD; Pseudogene, ankyrin repeats. | 0.804 |
yjeV | yoaI | b4670 | b1788 | Uncharacterized protein. | Uncharacterized protein. | 0.740 |
yjeV | yohO | b4670 | b4542 | Uncharacterized protein. | Putative membrane protein; Belongs to the UPF0387 family. | 0.804 |
yjeV | ypfM | b4670 | b4606 | Uncharacterized protein. | Stress-induced small enterobacterial protein. | 0.715 |
ylcH | yjeV | b4588 | b4670 | Uncharacterized protein, DLP12 prophage. | Uncharacterized protein. | 0.802 |
ylcH | yneM | b4588 | b4599 | Uncharacterized protein, DLP12 prophage. | Inner membrane-associated protein; Modulates intracellular Mg(2+) levels to maintain cellular integrity upon Mg(2+) limitation. Acts by binding and stabilizing the Mg(2+) transporter MgtA, thereby leading to increased intracellular level of Mg(2+). May inhibit FtsH proteolysis of MgtA. | 0.518 |
ylcH | yniD | b4588 | b4535 | Uncharacterized protein, DLP12 prophage. | Uncharacterized protein YniD; Pseudogene, ankyrin repeats. | 0.803 |
ylcH | yoaI | b4588 | b1788 | Uncharacterized protein, DLP12 prophage. | Uncharacterized protein. | 0.737 |
ylcH | yohO | b4588 | b4542 | Uncharacterized protein, DLP12 prophage. | Putative membrane protein; Belongs to the UPF0387 family. | 0.803 |
ylcH | ypfM | b4588 | b4606 | Uncharacterized protein, DLP12 prophage. | Stress-induced small enterobacterial protein. | 0.645 |
yneM | yjeV | b4599 | b4670 | Inner membrane-associated protein; Modulates intracellular Mg(2+) levels to maintain cellular integrity upon Mg(2+) limitation. Acts by binding and stabilizing the Mg(2+) transporter MgtA, thereby leading to increased intracellular level of Mg(2+). May inhibit FtsH proteolysis of MgtA. | Uncharacterized protein. | 0.521 |
yneM | ylcH | b4599 | b4588 | Inner membrane-associated protein; Modulates intracellular Mg(2+) levels to maintain cellular integrity upon Mg(2+) limitation. Acts by binding and stabilizing the Mg(2+) transporter MgtA, thereby leading to increased intracellular level of Mg(2+). May inhibit FtsH proteolysis of MgtA. | Uncharacterized protein, DLP12 prophage. | 0.518 |
yneM | yniD | b4599 | b4535 | Inner membrane-associated protein; Modulates intracellular Mg(2+) levels to maintain cellular integrity upon Mg(2+) limitation. Acts by binding and stabilizing the Mg(2+) transporter MgtA, thereby leading to increased intracellular level of Mg(2+). May inhibit FtsH proteolysis of MgtA. | Uncharacterized protein YniD; Pseudogene, ankyrin repeats. | 0.523 |
yneM | yoaI | b4599 | b1788 | Inner membrane-associated protein; Modulates intracellular Mg(2+) levels to maintain cellular integrity upon Mg(2+) limitation. Acts by binding and stabilizing the Mg(2+) transporter MgtA, thereby leading to increased intracellular level of Mg(2+). May inhibit FtsH proteolysis of MgtA. | Uncharacterized protein. | 0.455 |
yneM | yoaK | b4599 | b4676 | Inner membrane-associated protein; Modulates intracellular Mg(2+) levels to maintain cellular integrity upon Mg(2+) limitation. Acts by binding and stabilizing the Mg(2+) transporter MgtA, thereby leading to increased intracellular level of Mg(2+). May inhibit FtsH proteolysis of MgtA. | Inner membrane-associated protein. | 0.540 |
yneM | yohO | b4599 | b4542 | Inner membrane-associated protein; Modulates intracellular Mg(2+) levels to maintain cellular integrity upon Mg(2+) limitation. Acts by binding and stabilizing the Mg(2+) transporter MgtA, thereby leading to increased intracellular level of Mg(2+). May inhibit FtsH proteolysis of MgtA. | Putative membrane protein; Belongs to the UPF0387 family. | 0.523 |
page 1 of 3