STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHMLCHM like Rab escort protein. (637 aa)    
Predicted Functional Partners:
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.992
RAB7A
RAB7A, member RAS oncogene family.
    
 0.975
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
 0.973
ENSCWAP00000029324
annotation not available
    
 0.945
RAB1B
RAB1B, member RAS oncogene family.
    
 0.932
RAB31
RAB31, member RAS oncogene family.
    
 0.927
RAB30
RAB30, member RAS oncogene family.
    
 0.911
RAB1A
RAB1A, member RAS oncogene family.
    
 0.910
RAB7B
RAB7B, member RAS oncogene family.
    
 0.900
RAB12
RAB12, member RAS oncogene family.
    
 0.874
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.