Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIMREGPICALM interacting mitotic regulator. (228 aa)    
Predicted Functional Partners:
TDRD7
Tudor domain containing 7.
    
 
 0.951
CDCA3
Cell division cycle associated 3.
   
  
 0.889
CENPA
Centromere protein A.
   
  
 0.839
KIF20A
Kinesin family member 20A.
   
  
 0.836
CENPE
Centromere protein E.
   
  
 0.773
KIF2C
Kinesin family member 2C.
   
  
 0.765
KIF20B
Kinesin family member 20B.
   
  
 0.727
NUF2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.718
CDCA8
Cell division cycle associated 8.
   
  
 0.712
CDC20B
Cell division cycle 20B.
   
 
 0.705
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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