STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM3AFamily with sequence similarity 3 member A. (230 aa)    
Predicted Functional Partners:
CCDC22
Coiled-coil domain containing 22.
      
 0.912
CKLF
Chemokine like factor.
      
 0.755
MGAT1
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase.
     
 0.644
DAG1
Dystroglycan 1.
     
 0.616
POMT1
Protein O-mannosyltransferase 1.
     
 0.574
POMT2
Protein O-mannosyltransferase 2.
     
 0.574
POMGNT2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
     
 0.569
EOGT
EGF domain specific O-linked N-acetylglucosamine transferase.
     
 0.569
C1orf100
Chromosome 1 open reading frame 100.
      
 0.522
ECM1
Extracellular matrix protein 1.
     
 0.511
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.