STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM3AFamily with sequence similarity 3 member A. (230 aa)    
Predicted Functional Partners:
CCDC22
Coiled-coil domain containing 22.
      
 0.863
RXYLT1
Ribitol xylosyltransferase 1.
    
 0.765
CKLF
Chemokine like factor.
      
 0.717
POMT2
Protein O-mannosyltransferase 2.
     
 0.686
EOGT
EGF domain specific O-linked N-acetylglucosamine transferase.
     
 0.675
POMT1
Protein O-mannosyltransferase 1.
     
 0.666
POMGNT2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
     
 0.653
MGAT1
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase.
     
 0.646
B3GALNT2
beta-1,3-N-acetylgalactosaminyltransferase 2.
    
 
 0.597
B4GALT2
Beta-1,4-galactosyltransferase 2.
    
 0.582
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.