STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDC1NDC1 transmembrane nucleoporin. (675 aa)    
Predicted Functional Partners:
NUP155
Nucleoporin 155.
   
 0.998
NUP188
Nucleoporin 188.
    
 0.998
NUP93
Nucleoporin 93.
   
 0.998
AAAS
Aladin WD repeat nucleoporin.
   
 0.998
NUP35
Nucleoporin 35.
    
 0.995
NUP85
Nucleoporin 85.
   
 0.995
NUP205
Nucleoporin 205.
   
 0.993
NUP98
Nucleoporin 98.
    
 0.992
SEH1L
SEH1 like nucleoporin.
   
 0.992
NUP88
Nucleoporin 88.
    
 0.989
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.