Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NDC1NDC1 transmembrane nucleoporin. (675 aa)    
Predicted Functional Partners:
NUP93
Nucleoporin 93.
   
 0.999
NUP35
Nucleoporin 35.
   
 0.998
NUP188
Nucleoporin 188.
   
 0.998
AAAS
Aladin WD repeat nucleoporin.
   
 0.998
NUP155
Nucleoporin 155.
   
 0.997
NUP98
Nucleoporin 98.
    
 0.995
NUP85
Nucleoporin 85.
   
 0.995
NUP88
Nucleoporin 88.
    
 0.994
NUP153
Nucleoporin 153.
    
 0.991
RANBP2
RAN binding protein 2.
    
 0.990
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.