STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM179Transmembrane protein 179. (233 aa)    
Predicted Functional Partners:
BCCIP
BRCA2 and CDKN1A interacting protein.
      
 0.614
SRP14
Signal recognition particle 14.
      
 0.584
THSD7A
Thrombospondin type 1 domain containing 7A.
      
 0.577
FAM204A
Family with sequence similarity 204 member A.
      
 0.562
MZT1
Mitotic spindle organizing protein 1.
      
 0.560
ENSCWAP00000012469
annotation not available
      
 0.551
ENSCWAP00000022674
annotation not available
      
 0.551
EXD2
Exonuclease 3'-5' domain containing 2.
      
 0.512
ARF6
ADP ribosylation factor 6.
      
 0.487
PTGFR
Prostaglandin F receptor.
      
 0.477
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.