Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IYDIodotyrosine deiodinase. (289 aa)    
Predicted Functional Partners:
TRIM69
Tripartite motif containing 69.
    
 
 0.880
EPHX2
Epoxide hydrolase 2.
  
 
 0.869
RFK
Riboflavin kinase.
    
 0.867
METAP1D
Methionyl aminopeptidase type 1D, mitochondrial.
  
 
 0.855
MMAB
Metabolism of cobalamin associated B.
    
 0.811
FDX1
Ferredoxin 1.
    
 0.781
ENSCWAP00000005591
annotation not available
    
 0.781
DUOXA2
Dual oxidase maturation factor 2.
      
 0.777
AMACR
alpha-methylacyl-CoA racemase.
   
 
 0.744
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
    
  0.741
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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