STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH8Protocadherin 8. (1072 aa)    
Predicted Functional Partners:
ENSCWAP00000022480
annotation not available
      
 0.658
ENSCWAP00000028046
annotation not available
    
 
 0.645
TNRC6C
Trinucleotide repeat containing adaptor 6C.
    
 
 0.626
CDCP2
CUB domain containing protein 2.
      
 0.621
LHFPL2
LHFPL tetraspan subfamily member 2.
    
  0.610
INSYN2A
Inhibitory synaptic factor 2A.
      
 0.597
MYO9A
Myosin IXA.
    
 0.591
MYO9B
Myosin IXB.
    
 0.591
PCDH1
Protocadherin 1.
      
0.558
FJX1
Four-jointed box kinase 1.
   
 0.554
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.