Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NFRKBNuclear factor related to kappaB binding protein. (1297 aa)    
Predicted Functional Partners:
ACTR5
Actin related protein 5.
   
 0.999
TFPT
TCF3 fusion partner.
    
 0.999
INO80
INO80 complex ATPase subunit.
   
 0.998
INO80C
INO80 complex subunit C.
    
 0.998
ACTR8
Actin related protein 8.
    
 0.998
RUVBL1
RuvB like AAA ATPase 1.
    
 0.998
INO80E
INO80 complex subunit E.
    
 0.997
INO80D
INO80 complex subunit D.
    
 0.996
MCRS1
Microspherule protein 1.
   
 0.995
YY1
YY1 transcription factor.
    
 0.970
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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