STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FREM1FRAS1 related extracellular matrix 1. (2179 aa)    
Predicted Functional Partners:
FRAS1
Fraser extracellular matrix complex subunit 1.
    
0.973
FREM2
FRAS1 related extracellular matrix 2.
   
0.969
ITGA8
Integrin subunit alpha 8.
   
 
 0.910
ITGB1
Integrin subunit beta 1.
    
  0.906
NPNT
Nephronectin.
     
 0.905
CRIM1
Cysteine rich transmembrane BMP regulator 1.
    
 0.731
ENSCWAP00000026276
annotation not available
   
 
 0.727
GRIP1
Glutamate receptor interacting protein 1.
    
 
 0.727
PCSK2
Proprotein convertase subtilisin/kexin type 2.
   
 0.722
MATN2
Matrilin 2.
    
 0.700
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.