Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM45BTransmembrane protein 45B. (275 aa)    
Predicted Functional Partners:
APOA2
Apolipoprotein A2.
    
   0.778
KCTD2
Potassium channel tetramerization domain containing 2.
    
   0.763
GPA33
Glycoprotein A33.
   
  
 0.584
MINDY3
MINDY lysine 48 deubiquitinase 3.
      
 0.573
GHITM
Growth hormone inducible transmembrane protein.
      
 0.572
COPS7A
COP9 signalosome subunit 7A.
      
 0.507
TMEM98
Transmembrane protein 98.
      
 0.483
ENSCWAP00000027969
annotation not available
      
 0.428
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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