STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX11Sorting nexin 11. (270 aa)    
Predicted Functional Partners:
VPS35
VPS35 retromer complex component.
    
 0.976
VPS26B
VPS26, retromer complex component B.
    
 0.925
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
 0.914
VPS26A
VPS26, retromer complex component A.
    
 0.896
WLS
Wnt ligand secretion mediator.
    
 0.868
SNX27
Sorting nexin 27.
    
 0.823
ENSCWAP00000013964
annotation not available
    
 0.765
ENSCWAP00000020836
annotation not available
    
 0.765
SNX15
Sorting nexin 15.
     
 0.753
SNX17
Sorting nexin 17.
    
 0.735
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.