STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF130Ring finger protein 130. (419 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.783
ENSCWAP00000008705
annotation not available
      
 0.682
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.667
ENSCWAP00000006692
annotation not available
    
 0.665
RPS27A
Ribosomal protein S27a.
    
 0.665
ENSCWAP00000022461
annotation not available
    
 0.665
PTPN2
Protein tyrosine phosphatase non-receptor type 2.
    
 
 0.656
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.644
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.644
RXFP2
Relaxin family peptide receptor 2.
    
 0.644
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.