STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VNN3Vanin 3. (273 aa)    
Predicted Functional Partners:
HLCS
Holocarboxylase synthetase.
    
 0.865
PANK1
Pantothenate kinase 1.
     
 0.842
AASS
Aminoadipate-semialdehyde synthase.
    
 0.834
PANK4
Pantothenate kinase 4 (inactive).
     
 0.831
PANK3
Pantothenate kinase 3.
     
 0.826
PANK2
Pantothenate kinase 2.
     
 0.826
VNN1
Vanin 1.
     
  0.820
VNN2
Vanin 2.
     
  0.820
QPRT
Quinolinate phosphoribosyltransferase.
  
 
 0.683
SMS
Spermine synthase.
  
 
 0.679
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.