Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXA7Homeobox A7. (231 aa)    
Predicted Functional Partners:
HOXA6
Homeobox A6.
   
 
 0.976
HOXB5
Homeobox B5.
   
   0.968
HOXC5
Homeobox C5.
   
   0.967
HOXB6
Homeobox B6.
   
   0.949
HOXB7
Homeobox B7.
   
 
 0.916
HOXD4
Homeobox D4.
   
   0.891
HOXC6
Homeobox C6.
   
   0.869
ENSCWAP00000000044
annotation not available
   
 
 0.825
HOXC4
Homeobox C4.
    
 
 0.819
HOXB4
Homeobox B4.
   
   0.815
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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