STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LARP1La ribonucleoprotein 1, translational regulator. (1100 aa)    
Predicted Functional Partners:
LARP1B
La ribonucleoprotein 1B.
   
   0.949
RC3H1
Ring finger and CCCH-type domains 1.
    
 
 0.910
NFX1
Nuclear transcription factor, X-box binding 1.
   
   0.872
EIF4E
Eukaryotic translation initiation factor 4E.
   
 
 0.870
ENSCWAP00000007992
annotation not available
   
 
 0.860
ENSCWAP00000024121
annotation not available
   
 
 0.860
DHX15
DEAH-box helicase 15.
   
 
 0.859
LIN28A
Lin-28 homolog A.
    
 
 0.857
DKC1
Dyskerin pseudouridine synthase 1.
   
 
 0.854
RPS3
Ribosomal protein S3.
    
 
 0.827
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.