STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL19A1Collagen type XIX alpha 1 chain. (1140 aa)    
Predicted Functional Partners:
CDON
Cell adhesion associated, oncogene regulated.
    
 
 0.714
ZNHIT3
Zinc finger HIT-type containing 3.
      
 0.687
TEP1
Telomerase associated protein 1.
    
 0.681
SERPINH1
Serpin family H member 1.
    
 0.645
SIPA1L2
Signal induced proliferation associated 1 like 2.
      
 0.645
C1QC
Complement C1q C chain.
    
 
0.644
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.624
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.624
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.624
NUBPL
Nucleotide binding protein like.
      
 0.619
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.