STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL19A1Collagen type XIX alpha 1 chain. (1140 aa)    
Predicted Functional Partners:
P3H1
Prolyl 3-hydroxylase 1.
    
 0.695
ENSCWAP00000008987
annotation not available
   
 0.674
SERPINH1
Serpin family H member 1.
    
 0.665
ADAMTS14
ADAM metallopeptidase with thrombospondin type 1 motif 14.
    
 0.653
CNIH1
Cornichon family AMPA receptor auxiliary protein 1.
     
 0.652
COL6A2
Collagen type VI alpha 2 chain.
   
 0.632
ITGA1
Integrin subunit alpha 1.
    
 0.630
VWA1
Von Willebrand factor A domain containing 1.
      
 0.615
ENSCWAP00000025659
annotation not available
    
 0.613
ITGB5
Integrin subunit beta 5.
    
 0.613
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.