STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXA6Homeobox A6. (233 aa)    
Predicted Functional Partners:
HOXB5
Homeobox B5.
   
   0.986
HOXC5
Homeobox C5.
   
   0.984
HOXA7
Homeobox A7.
   
 
 0.976
HOXB7
Homeobox B7.
   
 
 0.970
HOXB6
Homeobox B6.
   
 
 0.946
HOXC6
Homeobox C6.
   
   0.937
HOXC4
Homeobox C4.
   
 
 0.921
HOXB4
Homeobox B4.
   
   0.817
HOXD4
Homeobox D4.
   
   0.800
HOXD3
Homeobox D3.
   
  
 0.698
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.