STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXD1Exonuclease 3'-5' domain containing 1. (570 aa)    
Predicted Functional Partners:
PIWIL2
Piwi like RNA-mediated gene silencing 2.
   
 
 0.969
BICD1
BICD cargo adaptor 1.
    
 
 0.857
BICD2
BICD cargo adaptor 2.
    
 
 0.857
DDX46
DEAD-box helicase 46.
    
 0.832
DYNLL1
Dynein light chain LC8-type 1.
    
 
 0.816
DYNLL2
Dynein light chain LC8-type 2.
    
 
 0.816
PIWIL1
Piwi like RNA-mediated gene silencing 1.
   
 
 0.787
ENSCWAP00000027255
annotation not available
   
 
 0.787
PIWIL4
Piwi like RNA-mediated gene silencing 4.
   
 
 0.783
TDRD5
Tudor domain containing 5.
   
  
 0.756
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.