STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000000543annotation not available (112 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.971
HDAC3
Histone deacetylase 3.
    
 0.866
ENSCWAP00000003862
annotation not available
    
 0.865
HDAC10
Histone deacetylase 10.
    
 0.865
HDAC9
Histone deacetylase 9.
    
 0.864
HDAC6
Histone deacetylase 6.
    
 0.864
HDAC5
Histone deacetylase 5.
    
 0.864
HDAC7
Histone deacetylase 7.
    
 0.864
HDAC11
Histone deacetylase 11.
    
 0.862
HDAC2
Histone deacetylase 2.
    
 0.861
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.