STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRCC3BRCA1/BRCA2-containing complex subunit 3. (291 aa)    
Predicted Functional Partners:
UIMC1
Ubiquitin interaction motif containing 1.
    
 0.999
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
    
 0.999
ENSCWAP00000015139
annotation not available
    
 0.999
BABAM2
BRISC and BRCA1 A complex member 2.
    
 0.999
ENSCWAP00000009529
annotation not available
    
 0.997
ENSCWAP00000022949
annotation not available
    
 0.997
SHMT2
Serine hydroxymethyltransferase 2.
    
 0.996
BRCA1
BRCA1 DNA repair associated.
    
 0.994
PSMC1
Proteasome 26S subunit, ATPase 1.
   
 0.992
PSMD6
Proteasome 26S subunit, non-ATPase 6.
   
 0.992
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.