STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GATA5GATA binding protein 5. (394 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5.
   
 0.975
ZFPM2
Zinc finger protein, FOG family member 2.
    
 0.967
SRF
Serum response factor.
    
 0.934
NFATC1
Nuclear factor of activated T cells 1.
    
 0.853
NFATC3
Nuclear factor of activated T cells 3.
    
 0.852
NFATC4
Nuclear factor of activated T cells 4.
     
 0.852
SQSTM1
Sequestosome 1.
    
  0.851
TBX20
T-box transcription factor 20.
   
 0.850
NFATC2
Nuclear factor of activated T cells 2.
    
 0.846
CGN
Cingulin.
     
 0.828
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.