STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFSF11TNF superfamily member 11. (323 aa)    
Predicted Functional Partners:
TNFRSF11B
TNF receptor superfamily member 11b.
    
 0.999
TNFRSF11A
TNF receptor superfamily member 11a.
    
 0.998
MITF
Melanocyte inducing transcription factor.
     
 0.927
TNFAIP6
TNF alpha induced protein 6.
    
 0.908
TNFSF13B
TNF superfamily member 13b.
    
 0.877
LTBR
Lymphotoxin beta receptor.
    
 0.859
TNF
Tumor necrosis factor.
     
 0.841
CD40
CD40 molecule.
    
 0.836
TRAF6
TNF receptor associated factor 6.
    
 0.833
ENSCWAP00000014628
annotation not available
    
 0.829
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.