STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFSF11TNF superfamily member 11. (323 aa)    
Predicted Functional Partners:
TNFRSF11A
TNF receptor superfamily member 11a.
    
 0.997
TNFRSF11B
TNF receptor superfamily member 11b.
    
 0.997
CD40
CD40 molecule.
   
 0.879
LTBR
Lymphotoxin beta receptor.
    
 0.876
ENSCWAP00000014628
annotation not available
    
 0.869
TNFSF13B
TNF superfamily member 13b.
   
 0.773
TNFAIP6
TNF alpha induced protein 6.
    
 0.767
TGFB2
Transforming growth factor beta 2.
      
 0.743
TRAF6
TNF receptor associated factor 6.
     
 0.742
TNF
Tumor necrosis factor.
   
 
 0.740
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.