Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
TATTyrosine aminotransferase. (454 aa)    
Predicted Functional Partners:
HPD
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.987
PAH
Phenylalanine hydroxylase.
   
 
 0.967
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.956
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.954
UBE3A
Ubiquitin protein ligase E3A.
    
   0.948
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
   
 0.932
BHMT2
Betaine--homocysteine S-methyltransferase 2.
   
 
 0.926
TH
Tyrosine hydroxylase.
   
 
 0.926
BHMT
Betaine--homocysteine S-methyltransferase.
   
 
 0.926
DDC
Dopa decarboxylase.
    
 0.925
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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