STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001027annotation not available (114 aa)    
Predicted Functional Partners:
SLC5A2
Solute carrier family 5 member 2.
    
 
 0.771
SYS1
SYS1 golgi trafficking protein.
      
 0.661
ENSCWAP00000006743
annotation not available
      
 0.659
TMEM223
Transmembrane protein 223.
      
 0.640
RNF6
Ring finger protein 6.
      
 0.578
PDZK1
PDZ domain containing 1.
    
 
 0.558
SLC5A4
Solute carrier family 5 member 4.
    
   0.552
SLC5A1
Solute carrier family 5 member 1.
    
   0.552
ENSCWAP00000012452
annotation not available
    
   0.552
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
      
 0.533
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.