STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST4Carbohydrate sulfotransferase 4. (388 aa)    
Predicted Functional Partners:
CHST2
Carbohydrate sulfotransferase 2.
     
0.909
GCNT1
Glucosaminyl (N-acetyl) transferase 1.
      
 0.726
FAM210B
Family with sequence similarity 210 member B.
      
 0.718
LMBR1
Limb development membrane protein 1.
      
 0.711
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6.
      
 0.685
KERA
Keratocan.
     
 0.665
SPNS2
Sphingolipid transporter 2.
      
 0.649
LUM
Lumican.
     
 0.639
CHST1
Carbohydrate sulfotransferase 1.
    
0.636
CHST3
Carbohydrate sulfotransferase 3.
    
0.627
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.