STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP7Vesicle associated membrane protein 7. (220 aa)    
Predicted Functional Partners:
SNAP29
Synaptosome associated protein 29.
    
 0.999
STX17
Syntaxin 17.
    
 0.999
STX4
Syntaxin 4.
    
 0.997
STX12
Syntaxin 12.
   
 0.995
SNAP25
Synaptosome associated protein 25.
    
 0.995
STX8
Syntaxin 8.
    
 0.993
STX7
Syntaxin 7.
   
 0.992
VAMP8
Vesicle associated membrane protein 8.
    
0.992
SNAP23
Synaptosome associated protein 23.
    
 0.991
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 0.990
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.