STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLNS1AChloride nucleotide-sensitive channel 1A. (237 aa)    
Predicted Functional Partners:
WDR77
WD repeat domain 77.
   
 0.998
PRMT5
Protein arginine methyltransferase 5.
   
 0.998
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.995
ENSCWAP00000010435
annotation not available
   
 0.994
ENSCWAP00000007547
annotation not available
   
 0.991
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.991
LSM10
LSM10, U7 small nuclear RNA associated.
   
 0.984
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.984
ENSCWAP00000002119
annotation not available
   
 0.979
ENSCWAP00000000357
annotation not available
   
 0.967
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.