Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAD23ARAD23 homolog A, nucleotide excision repair protein. (363 aa)    
Predicted Functional Partners:
ENSCWAP00000013737
annotation not available
    
 0.997
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.996
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.994
NGLY1
N-glycanase 1.
    
 0.989
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 
 0.978
UBB
Ubiquitin B.
    
 0.973
PSMC1
Proteasome 26S subunit, ATPase 1.
   
 0.971
XPA
XPA, DNA damage recognition and repair factor.
    
 0.970
UBE3A
Ubiquitin protein ligase E3A.
   
 0.969
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.966
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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