STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GADD45GIP1GADD45G interacting protein 1. (222 aa)    
Predicted Functional Partners:
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.987
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
   
 0.985
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.979
MRPL11
Mitochondrial ribosomal protein L11.
   
 
 0.978
MRPL50
Mitochondrial ribosomal protein L50.
   
 
 0.977
MRPL36
Mitochondrial ribosomal protein L36.
   
 
 0.976
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.975
MRPL24
Mitochondrial ribosomal protein L24.
   
 
 0.973
MRPS34
Mitochondrial ribosomal protein S34.
   
   0.969
MRPL20
Mitochondrial ribosomal protein L20.
   
 
 0.968
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.