STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VDAC1Voltage dependent anion channel 1. (283 aa)    
Predicted Functional Partners:
VDAC3
Voltage dependent anion channel 3.
  
 
0.999
VDAC2
Voltage dependent anion channel 2.
  
 
0.999
ENSCWAP00000022602
annotation not available
   
  0.998
HK1
Hexokinase 1.
   
 0.988
BCL2L1
BCL2 like 1.
    
 0.983
ENSCWAP00000003047
annotation not available
    
 0.979
ENSCWAP00000028050
annotation not available
    
 0.979
BCL2
BCL2 apoptosis regulator.
    
 0.974
PPIF
Peptidylprolyl isomerase F.
   
 0.972
SQSTM1
Sequestosome 1.
   
 0.970
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.