Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APOOApolipoprotein O. (198 aa)    
Predicted Functional Partners:
IMMT
Inner membrane mitochondrial protein.
    
 0.988
CHCHD3
Coiled-coil-helix-coiled-coil-helix domain containing 3.
   
 0.977
CHCHD6
Coiled-coil-helix-coiled-coil-helix domain containing 6.
   
 0.952
TIMMDC1
Translocase of inner mitochondrial membrane domain containing 1.
    
 
 0.935
MICOS13
Mitochondrial contact site and cristae organizing system subunit 13.
   
 0.896
ENSCWAP00000021275
annotation not available
   
   0.896
ENSCWAP00000023491
annotation not available
   
   0.896
APOOL
Apolipoprotein O like.
  
 
0.889
ENSCWAP00000008718
annotation not available
   
 
 0.836
ENSCWAP00000029386
annotation not available
   
 
 0.836
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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